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University
of Minnesota
Mouse Microarray Group |
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| 5-15-01 BMAP Files | |
| Array Picture |
A
jpeg image of the last chip printed. Probed with a Genisphere 3DNA feature
detection probe, and scanned on the Scanarray 5000.
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| Spot Layout |
A
comma-delimited spreadsheet showing the visual layout of spots on the
microarray. Download and open using the (File...Open...) command
within MS Excel.
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| Full Sample Info |
A
tab-delimited spreadsheet containing more extensive information on the
genes spotted in the array. Download and open using the File...Open...)
command within MS Excel.
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| QuantArray Import |
A
plain-text file used to tell the QuantArray software where samples are
located in the array. Specify this file as the "Gene Database"
in QuantArray. Genes are identified by their 96-well plate location in
the BMAP set. (5c10 indicates plate 5, well c10)
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A
file in Axon's .gal format that tells GenePix software where samples are
located in the array, and how to set up the quantification grids.
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Spotting
Details
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Spotted
in 48 sub-arrays (4x12) of 16 columns by 15 rows, with 0.28 mm between
spots. Two 384 well plates were dropped and spilled during this printing
run, resulting in some samples not being spotted. These changes are already
incorporated into the above files. Samples spotted at approximately 75
degrees F, and 42% relative humidity.
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